Using 12Mb capture to profile the Watkins bread wheat landrace diversity collection

Anthony Hall & Laura-Jayne Gardiner
Wheat has been domesticated into a large number of agricultural environments and has a remarkable ability to adapt to diverse environments. To understand this process, we survey genotype and DNA methylation across the Watkins bread wheat landrace collection, representing global genetic diversity. For each accession, we use gene based sequence capture (12Mb) to focus on the functionally relevant portion of the genome, followed by paired end sequencing on the Hiseq4000. All Watkins accessions therefore have genotypic data available plus sequence data generated after bisulfite treatment to allow methylation calls. This project was supported by the BBSRC via an ERA-CAPS grant BB/N005104/1, BB/N005155/1 (L.G, A.H, MB), a BBSRC/DBT grant BB/L011786/1 (L.O.), IWYP project grant BB/N020871/1 (R.J) and BBSRC Designing Future Wheat BB/P016855/1 (A.H, M.H).
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All of the data listed here is available under the prepublication data sharing principle of the Toronto agreement. By using this data, you agree to:
  • respect the rights of the data producers and contributors to analyze and publish the first global analyses and certain other reserved analyses of this data set in a peer-reviewed publication.
  • not redistribute, release, or otherwise provide access to the data to anyone outside of the group, until the data has been published & submitted to the public data repositories.
  • contact the authors to discuss any plans to publish data or analyses that utilize this data to avoid the overlap of any planned analyses.
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This agreement does not expire by time but only upon publication of the first global analysis by the data producers and contributors.
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